Pseudomonas putida HB3267, B479_19860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_19860
Name
Replicon chromosome
Genomic location 4391876 - 4392565 (+ strand)

Cross-References

RefSeq YP_007230807.1
GI 431803904
Entrez 14290355
INSDC AGA74864.1
NCBI Locus Tag B479_19860
UniParc UPI0002A15E2E
UniProtKB Acc L0FLM7
UniProtKB ID L0FLM7_PSEPU
UniRef100 UniRef100_L0FLM7
UniRef50 UniRef50_B0KKN0
UniRef90 UniRef90_B1J5K1

Product

Feature Type CDS
Coding Frame 1
Product Name
XRE family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.35
Kyte-Doolittle Hydrophobicity Value -0.142
Molecular Weight (kDa) 24748.8
Isoelectric Point (pI) 5.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 68 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000594 (1255 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_19860

Human Homologs

References

No references are associated with this feature.