Pseudomonas putida HB3267, B479_21230

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_21230
Name
Replicon chromosome
Genomic location 4675327 - 4676019 (- strand)

Cross-References

RefSeq YP_007231079.1
GI 431804176
EC Number 3.2.2.-
Entrez 14290627
INSDC AGA75136.1
NCBI Locus Tag B479_21230
UniParc UPI0002A170B0
UniProtKB Acc L0FQX4
UniProtKB ID L0FQX4_PSEPU
UniRef100 UniRef100_L0FQX4
UniRef50 UniRef50_Q83CW4
UniRef90 UniRef90_Q88N05

Product

Feature Type CDS
Coding Frame 1
Product Name
uracil-DNA glycosylase
Synonyms
Evidence for Translation
Charge (pH 7) 4.06
Kyte-Doolittle Hydrophobicity Value -0.209
Molecular Weight (kDa) 25663.2
Isoelectric Point (pI) 8.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 352 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000724 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_21230

Human Homologs

Ensembl 110, assembly GRCh38.p14
uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572]
E-value: 1.8e-60
Percent Identity: 51.6
Ensembl 110, assembly GRCh38.p14
uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572]
E-value: 1.8e-60
Percent Identity: 51.6

References

No references are associated with this feature.