Pseudomonas putida HB3267, B479_25030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_25030
Name
Replicon chromosome
Genomic location 5532922 - 5534277 (+ strand)

Cross-References

RefSeq YP_007231838.1
GI 431804935
Entrez 14291386
INSDC AGA75895.1
NCBI Locus Tag B479_25030
UniParc UPI0002A15BFE
UniProtKB Acc L0FTA1
UniProtKB ID L0FTA1_PSEPU
UniRef100 UniRef100_L0FTA1
UniRef50 UniRef50_W6V377
UniRef90 UniRef90_Q1IGE1

Product

Feature Type CDS
Coding Frame 1
Product Name
peptidase M16 domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.60
Kyte-Doolittle Hydrophobicity Value -0.260
Molecular Weight (kDa) 50095.5
Isoelectric Point (pI) 6.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 534 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000363 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_25030

Human Homologs

References

No references are associated with this feature.