Pseudomonas putida HB3267, B479_26205 (rph)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_26205
Name
rph
Replicon chromosome
Genomic location 5785755 - 5786477 (- strand)

Cross-References

RefSeq YP_007232071.1
GI 431805168
EC Number 2.7.7.56
Entrez 14291619
INSDC AGA76128.1
NCBI Locus Tag B479_26205
UniParc UPI0002174119
UniProtKB Acc L0FSX0
UniProtKB ID L0FSX0_PSEPU
UniRef100 UniRef100_A0A099N8G7
UniRef50 UniRef50_Q88BE0
UniRef90 UniRef90_Q88BE0

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonuclease PH
Synonyms
Evidence for Translation
Charge (pH 7) -1.61
Kyte-Doolittle Hydrophobicity Value -0.154
Molecular Weight (kDa) 25.7
Isoelectric Point (pI) 5.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 490 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004903 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_26205
Search term: rph
Search term: ribonuclease PH

Human Homologs

References

No references are associated with this feature.