Pseudomonas putida HB3267, B479_26240 (rpoZ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_26240
Name
rpoZ
Replicon chromosome
Genomic location 5793485 - 5793748 (+ strand)

Cross-References

RefSeq YP_007232078.1
GI 431805175
EC Number 2.7.7.6
Entrez 14291626
INSDC AGA76135.1
NCBI Locus Tag B479_26240
UniParc UPI000000FDAC
UniProtKB Acc L0FTZ8
UniProtKB ID L0FTZ8_PSEPU
UniRef100 UniRef100_A5WB18
UniRef50 UniRef50_Q606J4
UniRef90 UniRef90_A5WB18

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-directed RNA polymerase subunit omega
Synonyms
Evidence for Translation
Charge (pH 7) -9.79
Kyte-Doolittle Hydrophobicity Value -0.239
Molecular Weight (kDa) 9.7
Isoelectric Point (pI) 4.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 249 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004906 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_26240
Search term: rpoZ

Human Homologs

References

No references are associated with this feature.