Pseudomonas syringae pv. syringae B728a, Psyr_2133
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest |
| Locus Tag |
Psyr_2133
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2493154 - 2494095 (+ strand) |
Cross-References
| RefSeq | YP_235214.1 |
| GI | 66045373 |
| Entrez | 3367647 |
| INSDC | AAY37176.1 |
| NCBI Locus Tag | Psyr_2133 |
| UniParc | UPI000050D846 |
| UniProtKB Acc | Q4ZUJ6 |
| UniProtKB ID | Q4ZUJ6_PSEU2 |
| UniRef100 | UniRef100_Q4ZUJ6 |
| UniRef50 | UniRef50_D8IXT2 |
| UniRef90 | UniRef90_Q4ZUJ6 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
pseudouridine synthase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 1.55 |
| Kyte-Doolittle Hydrophobicity Value | -0.280 |
| Molecular Weight (kDa) | 35627.4 |
| Isoelectric Point (pI) | 7.38 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 560 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003402 (543 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psyr_2133
Search term: pseudouridine synthase
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
E-value:
3.1e-12
Percent Identity:
27.4
|
|
Ensembl
107, assembly
GRCh38.p13
|
RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180]
E-value:
3.1e-12
Percent Identity:
27.4
|
References
No references are associated with this feature.