Pseudomonas aeruginosa PA7, PSPA7_0324

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_0324
Name
Replicon chromosome
Genomic location 335600 - 336850 (- strand)

Cross-References

RefSeq YP_001345720.1
GI 152987751
Entrez 5359061
INSDC ABR84934.1
NCBI Locus Tag PSPA7_0324
UniParc UPI0000D734B5
UniProtKB Acc A6UY35
UniProtKB ID A6UY35_PSEA7
UniRef100 UniRef100_A6UY35
UniRef50 UniRef50_Q88JX6
UniRef90 UniRef90_A6UY35

Product

Feature Type CDS
Coding Frame 1
Product Name
putative porin
Synonyms
Evidence for Translation
Charge (pH 7) 1.59
Kyte-Doolittle Hydrophobicity Value -0.409
Molecular Weight (kDa) 45765.8
Isoelectric Point (pI) 7.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3SZD MEMBRANE PROTEIN 07/18/11 Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF) PSEUDOMONAS AERUGINOSA 2.311 X-RAY DIFFRACTION 91.6
4FMS TRANSPORT PROTEIN 06/18/12 Crystal structure of Pseudomonas aeruginosa OccK2 (OpdF) in complex with glucuronate PSEUDOMONAS AERUGINOSA 2.45 X-RAY DIFFRACTION 91.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000239 (1183 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_0324
Search term: putative porin

Human Homologs

References

No references are associated with this feature.