Pseudomonas aeruginosa PA7, PSPA7_0766

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_0766
Name
Replicon chromosome
Genomic location 769112 - 769615 (+ strand)

Cross-References

RefSeq YP_001346161.1
GI 152983741
Entrez 5359523
INSDC ABR80924.1
NCBI Locus Tag PSPA7_0766
UniParc UPI0000D735EB
UniProtKB Acc A6UZC6
UniProtKB ID A6UZC6_PSEA7
UniRef100 UniRef100_A6UZC6
UniRef50 UniRef50_Q4KF54
UniRef90 UniRef90_A6UZC6

Product

Feature Type CDS
Coding Frame 1
Product Name
phage major tail tube protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.01
Kyte-Doolittle Hydrophobicity Value -0.108
Molecular Weight (kDa) 18.0
Isoelectric Point (pI) 4.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6U5F ANTIMICROBIAL PROTEIN 08/27/19 CryoEM Structure of Pyocin R2 - precontracted - collar Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 3.8 ELECTRON MICROSCOPY 97.0
5W5E STRUCTURAL PROTEIN 06/15/17 Re-refinement of the pyocin tube structure Pseudomonas aeruginosa 3.5 ELECTRON MICROSCOPY 97.0
6PYT ANTIMICROBIAL PROTEIN 07/30/19 CryoEM Structure of Pyocin R2 - precontracted - trunk Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 2.9 ELECTRON MICROSCOPY 97.0
6U5B ANTIMICROBIAL PROTEIN 08/27/19 CryoEM Structure of Pyocin R2 - precontracted - baseplate Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 3.5 ELECTRON MICROSCOPY 97.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 83 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000606 (315 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_0766

Human Homologs

References

No references are associated with this feature.