Pseudomonas aeruginosa PA7, PSPA7_1642
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PA7
GCF_000017205.1|latest |
| Locus Tag |
PSPA7_1642
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1679339 - 1680565 (- strand) |
Cross-References
| RefSeq | YP_001347026.1 |
| GI | 152985781 |
| Entrez | 5357025 |
| NCBI Locus Tag | PSPA7_1642 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hypothetical protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.97 |
| Kyte-Doolittle Hydrophobicity Value | -0.194 |
| Molecular Weight (kDa) | 44.6 |
| Isoelectric Point (pI) | 9.29 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4N7S | HYDROLASE/HYDROLASE INHIBITOR | 10/16/13 | Crystal structure of Tse3-Tsi3 complex with Zinc ion | Pseudomonas aeruginosa | 2.101 | X-RAY DIFFRACTION | 96.5 |
| 4M5E | HYDROLASE | 08/08/13 | Tse3 structure | Pseudomonas aeruginosa | 1.49 | X-RAY DIFFRACTION | 96.5 |
| 3WA5 | HYDROLASE | 04/26/13 | Crystal Structure of type VI peptidoglycan muramidase effector Tse3 in complex with its cognate immunity protein Tsi3 | Pseudomonas aeruginosa | 1.9 | X-RAY DIFFRACTION | 96.3 |
| 4N80 | HYDROLASE/HYDROLASE INHIBITOR | 10/16/13 | Crystal structure of Tse3-Tsi3 complex | Pseudomonas aeruginosa | 2.4 | X-RAY DIFFRACTION | 96.5 |
| 4M5F | HYDROLASE INHIBITOR | 08/08/13 | complex structure of Tse3-Tsi3 | Pseudomonas aeruginosa | 2.5 | X-RAY DIFFRACTION | 96.5 |
| 4N88 | HYDROLASE/HYDROLASE INHIBITOR | 10/17/13 | Crystal structure of Tse3-Tsi3 complex with calcium ion | Pseudomonas aeruginosa | 2.8 | X-RAY DIFFRACTION | 96.5 |
| 4LUQ | PROTEIN BINDING/TOXIN INHIBITOR | 07/25/13 | Crystal structure of virulence effector Tse3 in complex with neutralizer Tsi3 | Pseudomonas aeruginosa | 1.77 | X-RAY DIFFRACTION | 96.3 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 2 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002158 (298 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPA7_1642
|
Human Homologs
References
No references are associated with this feature.