Pseudomonas aeruginosa PA7, PSPA7_1742

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_1742
Name
Replicon chromosome
Genomic location 1782013 - 1782708 (- strand)

Cross-References

RefSeq YP_001347126.1
GI 152985093
Entrez 5354925
INSDC ABR82276.1
NCBI Locus Tag PSPA7_1742
UniParc UPI0001577598
UniProtKB Acc A6V241
UniProtKB ID A6V241_PSEA7
UniRef100 UniRef100_A6V241
UniRef50 UniRef50_Q9RPT0
UniRef90 UniRef90_Q9RPT0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.10
Kyte-Doolittle Hydrophobicity Value -0.351
Molecular Weight (kDa) 25.9
Isoelectric Point (pI) 8.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7BTU TRANSFERASE 04/03/20 Crystal structure of TrmO from P. areuginosa Pseudomonas aeruginosa 1.91 X-RAY DIFFRACTION 96.5
7BU1 TRANSFERASE 04/03/20 Crystal structure of TrmO from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.49 X-RAY DIFFRACTION 96.5
7BTZ TRANSFERASE 04/03/20 Crystal structure of TrmO Pseudomonas aeruginosa 2.4 X-RAY DIFFRACTION 96.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 242 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002240 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_1742

Human Homologs

Ensembl 110, assembly GRCh38.p14
tRNA methyltransferase O [Source:HGNC Symbol;Acc:HGNC:30967]
E-value: 4.2e-30
Percent Identity: 45.8

References

No references are associated with this feature.