Pseudomonas aeruginosa PA7, PSPA7_1943 (oprB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_1943
Name
oprB
Replicon chromosome
Genomic location 1973779 - 1975143 (+ strand)

Cross-References

RefSeq YP_001347324.1
GI 152985104
Entrez 5359364
INSDC ABR82287.1
NCBI Locus Tag PSPA7_1943
UniParc UPI0001577344
UniProtKB Acc A6V2N9
UniProtKB ID A6V2N9_PSEA7
UniRef100 UniRef100_A6V2N9
UniRef50 UniRef50_Q51485
UniRef90 UniRef90_Q51485

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin OprB
Synonyms
Evidence for Translation
Charge (pH 7) -7.16
Kyte-Doolittle Hydrophobicity Value -0.559
Molecular Weight (kDa) 51.0
Isoelectric Point (pI) 5.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 52 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002430 (700 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_1943
Search term: oprB

Human Homologs

References

No references are associated with this feature.