Pseudomonas aeruginosa PA7, PSPA7_1956

Gene Feature Overview

Strain	Pseudomonas aeruginosa PA7 GCF_000017205.1|latest
Locus Tag	PSPA7_1956
Name
Replicon	chromosome
Genomic location	1986460 - 1987200 (- strand)

Cross-References

RefSeq	YP_001347337.1
GI	152988030
Entrez	5354384
INSDC	ABR85213.1
NCBI Locus Tag	PSPA7_1956
UniParc	UPI0000D73528
UniProtKB Acc	A6V2Q2
UniProtKB ID	A6V2Q2_PSEA7
UniRef100	UniRef100_W0YVD8
UniRef50	UniRef50_G2FE54
UniRef90	UniRef90_A0A072ZRY7

Product

Feature Type	CDS
Coding Frame	1
Product Name	short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7)	-5.04
Kyte-Doolittle Hydrophobicity Value	-0.062
Molecular Weight (kDa)	26.4
Isoelectric Point (pI)	5.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 646 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002442 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPA7_1956 Search term: short chain dehydrogenase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000507792 hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213] E-value: 6.6e-13 Percent Identity: 32.1
Ensembl 110, assembly GRCh38.p14	ENSP00000390208 hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213] E-value: 6.6e-13 Percent Identity: 32.1
Ensembl 110, assembly GRCh38.p14	ENSP00000424940 hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213] E-value: 6.6e-13 Percent Identity: 32.1
Ensembl 110, assembly GRCh38.p14	ENSP00000426272 hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213] E-value: 6.6e-13 Percent Identity: 32.1
Ensembl 110, assembly GRCh38.p14	ENSP00000493579 hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213] E-value: 6.6e-13 Percent Identity: 32.1
Ensembl 110, assembly GRCh38.p14	ENSP00000508071 hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213] E-value: 6.6e-13 Percent Identity: 32.1

References