Pseudomonas aeruginosa PA7, PSPA7_3872 (fliA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_3872
Name
fliA
Replicon chromosome
Genomic location 4003341 - 4004060 (- strand)

Cross-References

RefSeq YP_001349226.1
GI 152986686
Entrez 5356342
INSDC ABR83869.1
NCBI Locus Tag PSPA7_3872
UniParc UPI000045D153
UniProtKB Acc A6V841
UniProtKB ID A6V841_PSEA7
UniRef100 UniRef100_P29248
UniRef50 UniRef50_P29248
UniRef90 UniRef90_P29248

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar biosynthesis sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) -5.34
Kyte-Doolittle Hydrophobicity Value -0.422
Molecular Weight (kDa) 26.7
Isoelectric Point (pI) 5.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 577 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001370 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_3872
Search term: fliA

Human Homologs

References

No references are associated with this feature.