Pseudomonas aeruginosa PA7, PSPA7_4097 (rnd)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_4097
Name
rnd
Replicon chromosome
Genomic location 4231213 - 4232394 (- strand)

Cross-References

RefSeq YP_001349451.1
GI 152985900
EC Number 3.1.13.5
Entrez 5354773
INSDC ABR83083.1
NCBI Locus Tag PSPA7_4097
UniParc UPI000217CBA8
UniProtKB Acc A6V8R6
UniProtKB ID RND_PSEA7
UniRef100 UniRef100_A6V8R6
UniRef50 UniRef50_A6V8R6
UniRef90 UniRef90_A6V8R6

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonuclease D
Synonyms
Evidence for Translation
Charge (pH 7) -6.41
Kyte-Doolittle Hydrophobicity Value -0.381
Molecular Weight (kDa) 45253.6
Isoelectric Point (pI) 5.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 286 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001238 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_4097
Search term: rnd
Search term: ribonuclease D

Human Homologs

References

No references are associated with this feature.