Pseudomonas aeruginosa PA7, PSPA7_4122

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_4122
Name
Replicon chromosome
Genomic location 4258013 - 4258957 (+ strand)

Cross-References

RefSeq YP_001349476.1
GI 152983543
Entrez 5356022
INSDC ABR80726.1
NCBI Locus Tag PSPA7_4122
UniParc UPI0000D73292
UniProtKB Acc A6V8U1
UniProtKB ID A6V8U1_PSEA7
UniRef100 UniRef100_A6V8U1
UniRef50 UniRef50_Q9I476
UniRef90 UniRef90_Q9I476

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.56
Kyte-Doolittle Hydrophobicity Value -0.131
Molecular Weight (kDa) 33.7
Isoelectric Point (pI) 5.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
2AZP STRUCTURAL GENOMICS, UNKNOWN FUNCTION 09/12/05 Crystal Structure of PA1268 Solved by Sulfur SAD Pseudomonas aeruginosa 2.13 X-RAY DIFFRACTION 94.3

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 155 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001206 (807 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_4122

Human Homologs

Ensembl 110, assembly GRCh38.p14
trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
E-value: 6.8e-31
Percent Identity: 30.4

References

No references are associated with this feature.