Pseudomonas aeruginosa PA7, PSPA7_4546

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_4546
Name
Replicon chromosome
Genomic location 4671696 - 4672166 (+ strand)

Cross-References

RefSeq YP_001349895.1
GI 152988347
Entrez 5358132
INSDC ABR85530.1
NCBI Locus Tag PSPA7_4546
UniParc UPI00000C51E1
UniProtKB Acc A6VA10
UniProtKB ID A6VA10_PSEA7
UniRef100 UniRef100_W0YMY0
UniRef50 UniRef50_Q2L0H0
UniRef90 UniRef90_L8MEK7

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-binding stress protein
Synonyms
Evidence for Translation
Charge (pH 7) -7.04
Kyte-Doolittle Hydrophobicity Value -0.123
Molecular Weight (kDa) 17.5
Isoelectric Point (pI) 4.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
8FFA METAL BINDING PROTEIN 12/08/22 Crystal structure of Apo Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form) Pseudomonas aeruginosa PAO1 2.15 X-RAY DIFFRACTION 100.0
8FF9 METAL BINDING PROTEIN 12/08/22 Crystal structure of Apo Dps protein (PA0962) from Pseudomonas aeruginosa (orthorhombic form) Pseudomonas aeruginosa 1.7 X-RAY DIFFRACTION 100.0
8FFB METAL BINDING PROTEIN 12/08/22 Crystal structure of iron bound Dps protein (PA0962) from Pseudomonas aeruginosa (orthorhombic form) Pseudomonas aeruginosa PAO1 2.25 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 381 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000927 (509 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_4546

Human Homologs

References

No references are associated with this feature.