Pseudomonas aeruginosa PA7, PSPA7_4596 (rimO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_4596
Name
rimO
Replicon chromosome
Genomic location 4719984 - 4721306 (+ strand)

Cross-References

RefSeq YP_001349943.1
GI 152988570
Entrez 5354140
INSDC ABR85753.1
NCBI Locus Tag PSPA7_4596
UniParc UPI0000D724FB
UniProtKB Acc A6VA58
UniProtKB ID RIMO_PSEA7
UniRef100 UniRef100_A6VA58
UniRef50 UniRef50_A8AIT5
UniRef90 UniRef90_A6VA58

Product

Feature Type CDS
Coding Frame 1
Product Name
ribosomal protein S12 methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -19.84
Kyte-Doolittle Hydrophobicity Value -0.155
Molecular Weight (kDa) 48897.7
Isoelectric Point (pI) 4.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000882 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_4596
Search term: rimO

Human Homologs

References

No references are associated with this feature.