Pseudomonas aeruginosa PA7, PSPA7_4711

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_4711
Name
Replicon chromosome
Genomic location 4836551 - 4837318 (- strand)

Cross-References

RefSeq YP_001350053.1
GI 152987596
Entrez 5353985
INSDC ABR84779.1
NCBI Locus Tag PSPA7_4711
UniParc UPI0000D7255D
UniProtKB Acc A6VAG8
UniProtKB ID A6VAG8_PSEA7
UniRef100 UniRef100_A6VAG8
UniRef50 UniRef50_Q9I5D1
UniRef90 UniRef90_Q9I5D1

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.32
Kyte-Doolittle Hydrophobicity Value -0.402
Molecular Weight (kDa) 28.6
Isoelectric Point (pI) 6.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4BXE HYDROLASE/PEPTIDE 07/10/13 CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH ANHYDROMURAMIC PENTAPEPTIDE PSEUDOMONAS AERUGINOSA PAO1; SYNTHETIC CONSTRUCT 2.95 X-RAY DIFFRACTION 96.1
4BXD HYDROLASE/PEPTIDE 07/10/13 CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH TETRASACCHARIDE PENTAPEPTIDE PSEUDOMONAS AERUGINOSA PAO1; SYNTHETIC CONSTRUCT 3.1 X-RAY DIFFRACTION 96.1
4BXJ HYDROLASE 07/12/13 CRYSTAL STRUCTURE OF AMPDH3 FROM PSEUDOMONAS AERUGINOSA PSEUDOMONAS AERUGINOSA PAO1 2.35 X-RAY DIFFRACTION 96.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 225 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000780 (358 members)
Putative Inparalogs 1 predicted inparalogs
N-acetylmuramoyl-L-alanine amidase AmiD (PSPA7_0905) 77.4% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_4711

Human Homologs

References

No references are associated with this feature.