Pseudomonas aeruginosa PA7, PSPA7_5035 (rpoN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_5035
Name
rpoN
Replicon chromosome
Genomic location 5187742 - 5189235 (+ strand)

Cross-References

RefSeq YP_001350371.1
GI 152987329
Entrez 5359592
INSDC ABR84512.1
NCBI Locus Tag PSPA7_5035
UniParc UPI000157717A
UniProtKB Acc A6VBD6
UniProtKB ID A6VBD6_PSEA7
UniRef100 UniRef100_A6VBD6
UniRef50 UniRef50_P0A171
UniRef90 UniRef90_P49988

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase factor sigma-54
Synonyms
Evidence for Translation
Charge (pH 7) -30.12
Kyte-Doolittle Hydrophobicity Value -0.417
Molecular Weight (kDa) 56.0
Isoelectric Point (pI) 4.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 397 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004051 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_5035
Search term: rpoN

Human Homologs

References

No references are associated with this feature.