Pseudomonas aeruginosa PA7, PSPA7_5239 (mexD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_5239
Name
mexD
Replicon chromosome
Genomic location 5388990 - 5392121 (- strand)

Cross-References

RefSeq YP_001350571.1
GI 152987450
Entrez 5358108
INSDC ABR84633.1
NCBI Locus Tag PSPA7_5239
UniParc UPI0000D736CE
UniProtKB Acc A6VBY6
UniProtKB ID A6VBY6_PSEA7
UniRef100 UniRef100_A6VBY6
UniRef50 UniRef50_P31224
UniRef90 UniRef90_Q9HVI9

Product

Feature Type CDS
Coding Frame 1
Product Name
RND multidrug efflux transporter MexD
Synonyms
Evidence for Translation
Charge (pH 7) -15.59
Kyte-Doolittle Hydrophobicity Value 0.392
Molecular Weight (kDa) 111.6
Isoelectric Point (pI) 4.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000417 (2093 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_5239
Search term: mexD

Human Homologs

References

No references are associated with this feature.