Pseudomonas aeruginosa PA7, PSPA7_5370 (coaB)

Gene Feature Overview

Strain	Pseudomonas aeruginosa PA7 GCF_000017205.1|latest
Locus Tag	PSPA7_5370
Name	coaB
Replicon	chromosome
Genomic location	5535018 - 5535266 (- strand)

Cross-References

RefSeq	YP_001350700.1
GI	152985282
Entrez	5356296
INSDC	ABR82465.1
NCBI Locus Tag	PSPA7_5370
UniParc	UPI00015776AF
UniProtKB Acc	A6VCB5
UniProtKB ID	A6VCB5_PSEA7
UniRef100	UniRef100_A6VCB5
UniRef50	UniRef50_P03621
UniRef90	UniRef90_P03621

Product

Feature Type	CDS
Coding Frame	1
Product Name	bacteriophage Pf1 coat protein B
Synonyms
Evidence for Translation
Charge (pH 7)	3.95
Kyte-Doolittle Hydrophobicity Value	0.683
Molecular Weight (kDa)	8392.8
Isoelectric Point (pI)	10.17

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
1IFM	VIRUS	01/31/94	TWO FORMS OF PF1 INOVIRUS: X-RAY DIFFRACTION STUDIES ON A STRUCTURAL PHASE TRANSITION AND A CALCULATED LIBRATION NORMAL MODE OF THE ASYMMETRIC UNIT	Pseudomonas phage Pf1	3.3	FIBER DIFFRACTION	95.7
2XKM	VIRAL PROTEIN	07/09/10	Consensus structure of Pf1 filamentous bacteriophage from X-ray fibre diffraction and solid-state NMR	PSEUDOMONAS PHAGE PF1	3.3	FIBER DIFFRACTION, SOLID-STATE NMR	95.7
1QL1	VIRUS	08/20/99	INOVIRUS (FILAMENTOUS BACTERIOPHAGE) STRAIN PF1 MAJOR COAT PROTEIN ASSEMBLY	PSEUDOMONAS PHAGE PF1	3.1	FIBER DIFFRACTION	95.7
3IFM	VIRUS	01/16/94	PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA	Pseudomonas phage Pf1	3.3	FIBER DIFFRACTION	95.7
1IFN	VIRUS	01/31/94	TWO FORMS OF PF1 INOVIRUS: X-RAY DIFFRACTION STUDIES ON A STRUCTURAL PHASE TRANSITION AND A CALCULATED LIBRATION NORMAL MODE OF THE ASYMMETRIC UNIT	Pseudomonas phage Pf1	4	FIBER DIFFRACTION	95.7
6TUQ	VIRUS	01/08/20	Cryo-EM structure of Pf4 bacteriophage coat protein without ssDNA	Pseudomonas virus Pf1	3.9	ELECTRON MICROSCOPY	95.7
6TUP	VIRUS	01/08/20	Cryo-EM structure of Pf4 bacteriophage coat protein with single-stranded DNA	Pseudomonas aeruginosa PAO1; Pseudomonas virus Pf1	3.2	ELECTRON MICROSCOPY	95.7
4IFM	VIRUS	01/16/95	PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA	Pseudomonas phage Pf1	3.3	FIBER DIFFRACTION	95.7
1ZN5	VIRUS	05/11/05	Solid State NMR Structure of the low-temperature form of the Pf1 Major Coat Protein in Magnetically Aligned Bacteriophage	Pseudomonas phage Pf1	NOT	SOLID-STATE NMR	95.7
1PFI	VIRUS	04/06/94	PF1 VIRUS STRUCTURE: HELICAL COAT PROTEIN AND DNA WITH PARAXIAL PHOSPHATES	Pseudomonas phage Pf1	3	FIBER DIFFRACTION	95.7
2KSJ	VIRAL PROTEIN	01/05/10	Structure and Dynamics of the Membrane-bound form of Pf1 Coat Protein: Implications for Structural Rearrangement During Virus Assembly	Pseudomonas phage Pf1	NOT	SOLUTION NMR, SOLID-STATE NMR	95.7
2KLV	MEMBRANE PROTEIN	07/08/09	Membrane-bound structure of the Pf1 major coat protein in DHPC micelle	Pseudomonas phage Pf1	NOT	SOLUTION NMR	95.7
2IFN	VIRUS	01/16/94	PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA	Pseudomonas phage Pf1	4	FIBER DIFFRACTION	95.7
1PJF	VIRAL PROTEIN	06/02/03	Solid State NMR structure of the Pf1 Major Coat Protein in Magnetically Aligned Bacteriophage	Pseudomonas phage Pf1	NOT	SOLID-STATE NMR	95.7
1QL2	VIRUS	08/20/99	Inovirus (Filamentous Bacteriophage) Strain PF1 Major Coat Protein Assembly	PSEUDOMONAS PHAGE PF1	3.1	FIBER DIFFRACTION	95.7
2IFM	VIRUS	01/16/95	PF1 FILAMENTOUS BACTERIOPHAGE: REFINEMENT OF A MOLECULAR MODEL BY SIMULATED ANNEALING USING 3.3 ANGSTROMS RESOLUTION X-RAY FIBRE DIFFRACTION DATA	Xanthomonas phage Xf	3.3	FIBER DIFFRACTION	95.7

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000699 (125 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPA7_5370 Search term: coaB Search term: bacteriophage Pf1 coat protein B

Human Homologs

References