Pseudomonas aeruginosa PA7, PSPA7_5460 (truB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_5460
Name
truB
Replicon chromosome
Genomic location 5628084 - 5628998 (- strand)

Cross-References

RefSeq YP_001350784.1
GI 152987416
EC Number 5.4.99.-
Entrez 5353509
INSDC ABR84599.1
NCBI Locus Tag PSPA7_5460
UniParc UPI0000D726DC
UniProtKB Acc A6VCJ9
UniProtKB ID TRUB_PSEA7
UniRef100 UniRef100_A6VCJ9
UniRef50 UniRef50_P72154
UniRef90 UniRef90_P72154

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA pseudouridine synthase B
Synonyms
Evidence for Translation
Charge (pH 7) -0.43
Kyte-Doolittle Hydrophobicity Value -0.213
Molecular Weight (kDa) 33.5
Isoelectric Point (pI) 6.88

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 658 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004387 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_5460
Search term: truB

Human Homologs

Ensembl 110, assembly GRCh38.p14
TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
E-value: 8.9e-36
Percent Identity: 39.8

References

No references are associated with this feature.