Pseudomonas entomophila L48, PSEEN5427 (rpmB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas entomophila L48
GCF_000026105.1|latest
Locus Tag
PSEEN5427
Name
rpmB
Replicon chromosome
Genomic location 5747999 - 5748235 (- strand)

Cross-References

RefSeq YP_610824.1
GI 104784326
Entrez 4085698
INSDC CAK18041.1
UniParc UPI0000D791F7
UniProtKB Acc Q1I2U5
UniProtKB ID RL28_PSEE4
UniRef100 UniRef100_Q1I2U5
UniRef50 UniRef50_A0KEM9
UniRef90 UniRef90_Q4K3S6

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L28
Synonyms
Evidence for Translation
Charge (pH 7) 12.67
Kyte-Doolittle Hydrophobicity Value -0.528
Molecular Weight (kDa) 8.9
Isoelectric Point (pI) 12.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 460 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004887 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEEN5427
Search term: rpmB

Human Homologs

References

No references are associated with this feature.