Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3824

Gene Feature Overview

Strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1 GCF_000219605.1|latest
Locus Tag	PSTAB_3824
Name
Replicon	chromosome
Genomic location	4122554 - 4124071 (- strand)

Cross-References

RefSeq	YP_004716194.1
GI	339495901
Entrez	10944867
INSDC	AEJ07105.1
NCBI Locus Tag	PSTAB_3824
UniParc	UPI000215DF1C
UniProtKB Acc	F8H381
UniProtKB ID	F8H381_PSEUT
UniRef100	UniRef100_F8H381
UniRef50	UniRef50_P21685
UniRef90	UniRef90_A0A098FYP8

Product

Feature Type	CDS
Coding Frame	1
Product Name	phytoene desaturase
Synonyms
Evidence for Translation
Charge (pH 7)	0.22
Kyte-Doolittle Hydrophobicity Value	-0.214
Molecular Weight (kDa)	56151.3
Isoelectric Point (pI)	7.03

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 312 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG016700 (72 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAB_3824 Search term: phytoene desaturase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000517901 retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991] E-value: 4.3e-11 Percent Identity: 23.4
Ensembl 110, assembly GRCh38.p14	ENSP00000295802 retinol saturase [Source:HGNC Symbol;Acc:HGNC:25991] E-value: 4.3e-11 Percent Identity: 23.4

References