Pseudomonas stutzeri RCH2, Psest_0024

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_0024
Name
Replicon chromosome
Genomic location 24677 - 25702 (+ strand)

Cross-References

RefSeq YP_007238267.1
GI 431925233
Entrez 14297879
INSDC AGA84637.1
NCBI Locus Tag Psest_0024
UniParc UPI0002A195DD
UniProtKB Acc L0GFU7
UniProtKB ID L0GFU7_PSEST
UniRef100 UniRef100_L0GFU7
UniRef50 UniRef50_C1DFV9
UniRef90 UniRef90_A4VFH9

Product

Feature Type CDS
Coding Frame 1
Product Name
LysM domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.27
Kyte-Doolittle Hydrophobicity Value -0.197
Molecular Weight (kDa) 37392.2
Isoelectric Point (pI) 5.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 109 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000020 (467 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_0024

Human Homologs

References

No references are associated with this feature.