Pseudomonas stutzeri RCH2, Psest_0629

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_0629
Name
Replicon chromosome
Genomic location 679921 - 682446 (+ strand)

Cross-References

RefSeq YP_007238858.1
GI 431925824
Entrez 14298484
INSDC AGA85228.1
NCBI Locus Tag Psest_0629
UniParc UPI000290E6F8
UniProtKB Acc L0GER3
UniProtKB ID L0GER3_PSEST
UniRef100 UniRef100_A0A0C2RP08
UniRef50 UniRef50_B6IT84
UniRef90 UniRef90_S6ARF4

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent helicase HrpB
Synonyms
Evidence for Translation
Charge (pH 7) -3.74
Kyte-Doolittle Hydrophobicity Value -0.219
Molecular Weight (kDa) 92.3
Isoelectric Point (pI) 6.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 315 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001718 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_0629

Human Homologs

Ensembl 110, assembly GRCh38.p14
DEAH-box helicase 8 [Source:HGNC Symbol;Acc:HGNC:2749]
E-value: 1.6e-58
Percent Identity: 32.8
Ensembl 110, assembly GRCh38.p14
DEAH-box helicase 8 [Source:HGNC Symbol;Acc:HGNC:2749]
E-value: 1.6e-58
Percent Identity: 32.8
Ensembl 110, assembly GRCh38.p14
DEAH-box helicase 8 [Source:HGNC Symbol;Acc:HGNC:2749]
E-value: 1.6e-58
Percent Identity: 32.8
Ensembl 110, assembly GRCh38.p14
DEAH-box helicase 8 [Source:HGNC Symbol;Acc:HGNC:2749]
E-value: 1.6e-58
Percent Identity: 32.8

References

No references are associated with this feature.