Pseudomonas stutzeri RCH2, Psest_0983

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_0983
Name
Replicon chromosome
Genomic location 1065687 - 1066604 (+ strand)

Cross-References

RefSeq YP_007239188.1
GI 431926154
EC Number 4.2.1.70
Entrez 14298837
INSDC AGA85558.1
NCBI Locus Tag Psest_0983
UniParc UPI0002A19166
UniProtKB Acc L0GFQ4
UniProtKB ID L0GFQ4_PSEST
UniRef100 UniRef100_L0GFQ4
UniRef50 UniRef50_Q8XZV4
UniRef90 UniRef90_A4VPN8

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA pseudouridine synthase B
Synonyms
Evidence for Translation
Charge (pH 7) -2.40
Kyte-Doolittle Hydrophobicity Value -0.229
Molecular Weight (kDa) 33535.0
Isoelectric Point (pI) 6.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 658 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004387 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_0983

Human Homologs

Ensembl 110, assembly GRCh38.p14
TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
E-value: 8.1e-29
Percent Identity: 36.7

References

No references are associated with this feature.