Pseudomonas stutzeri RCH2, Psest_1988

Gene Feature Overview

Strain	Pseudomonas stutzeri RCH2 GCF_000327065.1|latest
Locus Tag	Psest_1988
Name
Replicon	chromosome
Genomic location	2105689 - 2107371 (+ strand)

Cross-References

RefSeq	YP_007240157.1
GI	431927123
Entrez	14299840
INSDC	AGA86527.1
NCBI Locus Tag	Psest_1988
UniParc	UPI000265FD03
UniProtKB Acc	L0GL74
UniProtKB ID	L0GL74_PSEST
UniRef100	UniRef100_A0A023WSQ0
UniRef50	UniRef50_P0AG69
UniRef90	UniRef90_Q9HZ71

Product

Feature Type	CDS
Coding Frame	1
Product Name	30S ribosomal protein S1P
Synonyms
Evidence for Translation
Charge (pH 7)	-31.06
Kyte-Doolittle Hydrophobicity Value	-0.368
Molecular Weight (kDa)	62.0
Isoelectric Point (pI)	4.53

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 596 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002453 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psest_1988 Search term: 30S ribosomal protein S1P

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000480986 zinc finger CCHC-type containing 17 [Source:HGNC Symbol;Acc:HGNC:30246] E-value: 2.5e-07 Percent Identity: 38.0

References