Pseudomonas stutzeri RCH2, Psest_2014
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri RCH2
GCF_000327065.1|latest |
| Locus Tag |
Psest_2014
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2132881 - 2134476 (- strand) |
Cross-References
| RefSeq | YP_007240178.1 |
| GI | 431927144 |
| EC Number | 4.1.3.1 |
| Entrez | 14299866 |
| NCBI Locus Tag | Psest_2014 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
isocitrate lyase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -12.85 |
| Kyte-Doolittle Hydrophobicity Value | -0.312 |
| Molecular Weight (kDa) | 58783.9 |
| Isoelectric Point (pI) | 5.37 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6G1O | LYASE | 03/21/18 | Structure of Pseudomonas aeruginosa Isocitrate Lyase, ICL | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 1.882 | X-RAY DIFFRACTION | 90.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 268 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002919 (354 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psest_2014
Search term: isocitrate lyase
|
Human Homologs
References
No references are associated with this feature.