Pseudomonas stutzeri RCH2, Psest_3107

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_3107
Name
Replicon chromosome
Genomic location 3284379 - 3285074 (- strand)

Cross-References

RefSeq YP_007241233.1
GI 431928199
EC Number 3.2.2.-
Entrez 14300956
INSDC AGA87603.1
NCBI Locus Tag Psest_3107
UniParc UPI0002A199D4
UniProtKB Acc L0GLI6
UniProtKB ID L0GLI6_PSEST
UniRef100 UniRef100_L0GLI6
UniRef50 UniRef50_Q9Z7D3
UniRef90 UniRef90_F2MWY6

Product

Feature Type CDS
Coding Frame 1
Product Name
uracil-DNA glycosylase
Synonyms
Evidence for Translation
Charge (pH 7) 7.36
Kyte-Doolittle Hydrophobicity Value -0.346
Molecular Weight (kDa) 25949.7
Isoelectric Point (pI) 9.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 353 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000724 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_3107

Human Homologs

Ensembl 110, assembly GRCh38.p14
uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572]
E-value: 1.4e-60
Percent Identity: 50.2
Ensembl 110, assembly GRCh38.p14
uracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572]
E-value: 1.4e-60
Percent Identity: 50.2

References

No references are associated with this feature.