Pseudomonas stutzeri RCH2, Psest_3223
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri RCH2
GCF_000327065.1|latest |
| Locus Tag |
Psest_3223
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3395845 - 3396804 (+ strand) |
Cross-References
| RefSeq | YP_007241347.1 |
| GI | 431928313 |
| Entrez | 14301072 |
| NCBI Locus Tag | Psest_3223 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
lactate dehydrogenase-like oxidoreductase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.70 |
| Kyte-Doolittle Hydrophobicity Value | 0.008 |
| Molecular Weight (kDa) | 34437.1 |
| Isoelectric Point (pI) | 5.20 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000893 (1006 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Psest_3223
Search term: lactate dehydrogenase-like oxidoreductase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
E-value:
3.0e-34
Percent Identity:
31.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
E-value:
3.0e-34
Percent Identity:
31.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
E-value:
3.0e-34
Percent Identity:
31.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
E-value:
3.0e-34
Percent Identity:
31.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
E-value:
3.0e-34
Percent Identity:
31.6
|
|
Ensembl
110, assembly
GRCh38.p14
|
phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
E-value:
3.0e-34
Percent Identity:
31.6
|
References
No references are associated with this feature.