Pseudomonas stutzeri RCH2, Psest_3608

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_3608
Name
Replicon chromosome
Genomic location 3769951 - 3771144 (- strand)

Cross-References

RefSeq YP_007241726.1
GI 431928692
Entrez 14301455
NCBI Locus Tag Psest_3608

Product

Feature Type CDS
Coding Frame 1
Product Name
translation elongation factor TU
Synonyms
Evidence for Translation
Charge (pH 7) -11.75
Kyte-Doolittle Hydrophobicity Value -0.186
Molecular Weight (kDa) 43580.6
Isoelectric Point (pI) 5.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4IW3 METAL BINDING PROTEIN/TRANSLATION 01/23/13 Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) in complex with elongation factor Tu (EF-Tu) Pseudomonas putida 2.697 X-RAY DIFFRACTION 92.4
4ZV4 TRANSLATION 05/18/15 Structure of Tse6 in complex with EF-Tu Pseudomonas aeruginosa; Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) 3.504 X-RAY DIFFRACTION 90.4
4J0Q TRANSLATION 01/31/13 Crystal structure of Pseudomonas putida elongation factor Tu (EF-Tu) Pseudomonas putida 2.294 X-RAY DIFFRACTION 92.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001434 (870 members)
Putative Inparalogs 1 predicted inparalogs
translation elongation factor 1A (EF-1A/EF-Tu) (Psest_3622) 100.0% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_3608

Human Homologs

Ensembl 110, assembly GRCh38.p14
Tu translation elongation factor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12420]
E-value: 7.8e-133
Percent Identity: 56.5

References

No references are associated with this feature.