Pseudomonas mendocina NK-01, MDS_0808

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0808
Name
Replicon chromosome
Genomic location 887029 - 887400 (+ strand)

Cross-References

RefSeq YP_004378591.1
GI 330501722
Entrez 10455590
INSDC AEB56839.1
NCBI Locus Tag MDS_0808
UniParc UPI000206EB74
UniProtKB Acc F4DQ47
UniProtKB ID F4DQ47_PSEMN
UniRef100 UniRef100_F4DQ47
UniRef50 UniRef50_Q4KIW3
UniRef90 UniRef90_A4XQ78

Product

Feature Type CDS
Coding Frame 1
Product Name
translation initiation factor 1
Synonyms
Evidence for Translation
Charge (pH 7) 6.31
Kyte-Doolittle Hydrophobicity Value -0.337
Molecular Weight (kDa) 12867.7
Isoelectric Point (pI) 9.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 244 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004470 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0808

Human Homologs

References

No references are associated with this feature.