Pseudomonas mendocina NK-01, MDS_2412

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2412
Name
Replicon chromosome
Genomic location 2634166 - 2635026 (+ strand)

Cross-References

RefSeq YP_004380195.1
GI 330503326
Entrez 10457194
INSDC AEB58443.1
NCBI Locus Tag MDS_2412
UniParc UPI000206E55B
UniProtKB Acc F4DU15
UniProtKB ID F4DU15_PSEMN
UniRef100 UniRef100_F4DU15
UniRef50 UniRef50_Q88HU8
UniRef90 UniRef90_F4DU15

Product

Feature Type CDS
Coding Frame 1
Product Name
Ku domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 8.45
Kyte-Doolittle Hydrophobicity Value -0.441
Molecular Weight (kDa) 32125.8
Isoelectric Point (pI) 9.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 170 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003323 (508 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2412

Human Homologs

References

No references are associated with this feature.