Pseudomonas mendocina NK-01, MDS_2963

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2963
Name
Replicon chromosome
Genomic location 3269886 - 3272261 (- strand)

Cross-References

RefSeq YP_004380746.1
GI 330503877
Entrez 10457745
INSDC AEB58994.1
NCBI Locus Tag MDS_2963
UniParc UPI000206E590
UniProtKB Acc F4E054
UniProtKB ID F4E054_PSEMN
UniRef100 UniRef100_F4E054
UniRef50 UniRef50_W6QWF4
UniRef90 UniRef90_F4E054

Product

Feature Type CDS
Coding Frame 1
Product Name
coenzyme PQQ biosynthesis protein PqqF
Synonyms
Evidence for Translation
Charge (pH 7) -10.23
Kyte-Doolittle Hydrophobicity Value -0.037
Molecular Weight (kDa) 86075.7
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 404 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003460 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2963

Human Homologs

Ensembl 110, assembly GRCh38.p14
nardilysin convertase [Source:HGNC Symbol;Acc:HGNC:7995]
E-value: 1.8e-19
Percent Identity: 33.0

References

No references are associated with this feature.