Pseudomonas syringae pv. tomato DC3000, PSPTO_0062

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0062
NCBI Old Locus Tag	PSPTO0062
Name	Synonym: PSPTO0062
Replicon	chromosome
Genomic location	83552 - 84859 (- strand)

Cross-References

RefSeq	NP_789921.1
GI	28867302
Entrez	1181670
INSDC	AAO53616.1
NCBI Locus Tag	PSPTO_0062
NCBI Old Locus Tag	PSPTO0062
UniParc	UPI00000082CB
UniProtKB Acc	Q88BF5
UniProtKB ID	Q88BF5_PSESM
UniRef100	UniRef100_Q88BF5
UniRef50	UniRef50_E1PKM6
UniRef90	UniRef90_Q88BF5

Product

Feature Type	CDS
Coding Frame	1
Product Name	citrate transporter
Synonyms
Evidence for Translation
Charge (pH 7)	3.58
Kyte-Doolittle Hydrophobicity Value	1.008
Molecular Weight (kDa)	46.4
Isoelectric Point (pI)	8.42

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 81 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005011 (515 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0062 Search term: citrate transporter

Human Homologs

References