Pseudomonas syringae pv. tomato DC3000, PSPTO_0063

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0063
NCBI Old Locus Tag	PSPTO0063
Name	Synonym: PSPTO0063
Replicon	chromosome
Genomic location	85159 - 85557 (+ strand)

Cross-References

RefSeq	NP_789922.1
GI	28867303
Entrez	1181671
INSDC	AAO53617.1
NCBI Locus Tag	PSPTO_0063
NCBI Old Locus Tag	PSPTO0063
UniParc	UPI00000082CC
UniProtKB Acc	Q88BF4
UniProtKB ID	Q88BF4_PSESM
UniRef100	UniRef100_Q88BF4
UniRef50	UniRef50_D7HTR3
UniRef90	UniRef90_Q88BF4

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-4.58
Kyte-Doolittle Hydrophobicity Value	-0.118
Molecular Weight (kDa)	14.6
Isoelectric Point (pI)	5.82

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 157 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001522 (1100 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0063

Human Homologs

References