Strain |
Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest |
Locus Tag |
PSPTO_0072
|
NCBI Old Locus Tag | PSPTO0072 |
Name |
Synonym: PSPTO0072 |
Replicon | chromosome |
Genomic location | 94399 - 94779 (- strand) |
RefSeq | NP_789931.1 |
GI | 28867312 |
Entrez | 1181680 |
INSDC | AAO53626.1 |
NCBI Locus Tag | PSPTO_0072 |
NCBI Old Locus Tag | PSPTO0072 |
UniParc | UPI00000082D5 |
UniProtKB Acc | Q88BE5 |
UniProtKB ID | Q88BE5_PSESM |
UniRef100 | UniRef100_Q88BE5 |
UniRef50 | UniRef50_A0A0B7DKC4 |
UniRef90 | UniRef90_A0A0B7DKC4 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
endoribonuclease L-PSP
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -2.78 |
Kyte-Doolittle Hydrophobicity Value | 0.229 |
Molecular Weight (kDa) | 13.4 |
Isoelectric Point (pI) | 4.74 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
3K0T | SUGAR BINDING PROTEIN | 09/25/09 | Crystal structure of PSPTO -PSP protein in complex with D-beta-Glucose from Pseudomonas syringae pv. tomato str. DC3000 | Pseudomonas syringae pv. tomato | 2.1 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 538 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG004908 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PSPTO_0072
Search term: endoribonuclease L-PSP
|
Ensembl
110, assembly
GRCh38.p14
|
reactive intermediate imine deaminase A homolog [Source:HGNC Symbol;Acc:HGNC:16897]
E-value:
3.8e-25
Percent Identity:
44.0
|