Pseudomonas syringae pv. tomato DC3000, PSPTO_0080 (pyrE)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0080
NCBI Old Locus Tag	PSPTO0080
Name	pyrE Synonym: PSPTO0080
Replicon	chromosome
Genomic location	101265 - 101906 (+ strand)

Cross-References

RefSeq	NP_789939.1
GI	28867320
Entrez	1181688
INSDC	AAO53634.1
NCBI Locus Tag	PSPTO_0080
NCBI Old Locus Tag	PSPTO0080
UniParc	UPI00000082DD
UniProtKB Acc	Q88BD7
UniProtKB ID	PYRE_PSESM
UniRef100	UniRef100_Q88BD7
UniRef50	UniRef50_O94331
UniRef90	UniRef90_Q4K3R9

Product

Feature Type	CDS
Coding Frame	1
Product Name	orotate phosphoribosyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.07
Kyte-Doolittle Hydrophobicity Value	0.062
Molecular Weight (kDa)	23.2
Isoelectric Point (pI)	5.30

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 323 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004900 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0080 Search term: pyrE Search term: orotate phosphoribosyltransferase

Human Homologs

References