Pseudomonas syringae pv. tomato DC3000, PSPTO_0121

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0121
NCBI Old Locus TagPSPTO0121
Name
Synonym: PSPTO0121
Replicon chromosome
Genomic location 145643 - 146884 (- strand)

Cross-References

RefSeq NP_789980.1
GI 28867361
Entrez 1181729
INSDC AAO53675.1
NCBI Locus Tag PSPTO_0121
NCBI Old Locus Tag PSPTO0121
UniParc UPI0000008306
UniProtKB Acc Q88B96
UniProtKB ID Q88B96_PSESM
UniRef100 UniRef100_Q88B96
UniRef50 UniRef50_Q88B96
UniRef90 UniRef90_Q88B96

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.62
Kyte-Doolittle Hydrophobicity Value 0.985
Molecular Weight (kDa) 43.7
Isoelectric Point (pI) 8.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 126 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005019 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0121
Search term: membrane protein

Human Homologs

References

No references are associated with this feature.