Pseudomonas syringae pv. tomato DC3000, PSPTO_0163

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0163
NCBI Old Locus Tag	PSPTO0163
Name	Synonym: PSPTO0163
Replicon	chromosome
Genomic location	182751 - 183083 (- strand)

Cross-References

RefSeq	NP_790022.1
GI	28867403
Entrez	1181771
INSDC	AAO53717.1
NCBI Locus Tag	PSPTO_0163
NCBI Old Locus Tag	PSPTO0163
UniParc	UPI0000008330
UniProtKB Acc	Q88B56
UniProtKB ID	Q88B56_PSESM
UniRef100	UniRef100_Q88B56
UniRef50	UniRef50_Q48QH0
UniRef90	UniRef90_Q48QH0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-3.91
Kyte-Doolittle Hydrophobicity Value	-0.105
Molecular Weight (kDa)	12.3
Isoelectric Point (pI)	6.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 38 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG014282 (468 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0163

Human Homologs

References