Pseudomonas syringae pv. tomato DC3000, PSPTO_0232

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0232
NCBI Old Locus Tag	PSPTO0232
Name	Synonym: PSPTO0232
Replicon	chromosome
Genomic location	253090 - 253365 (- strand)

Cross-References

RefSeq	NP_790083.1
GI	28867464
Entrez	1181840
INSDC	AAO53778.1
NCBI Locus Tag	PSPTO_0232
NCBI Old Locus Tag	PSPTO0232
UniParc	UPI0000008368
UniProtKB Acc	Q88B01
UniProtKB ID	Q88B01_PSESM
UniRef100	UniRef100_Q88B01
UniRef50	UniRef50_Q88B01
UniRef90	UniRef90_Q88B01

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-15.76
Kyte-Doolittle Hydrophobicity Value	-0.209
Molecular Weight (kDa)	10.3
Isoelectric Point (pI)	3.68

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 11 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004848 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0232

Human Homologs

References