Pseudomonas syringae pv. tomato DC3000, PSPTO_0261

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0261
NCBI Old Locus Tag	PSPTO0261
Name	Synonym: PSPTO0261
Replicon	chromosome
Genomic location	284127 - 284615 (+ strand)

Cross-References

RefSeq	NP_790112.1
GI	28867493
Entrez	1181869
INSDC	AAO53807.1
NCBI Locus Tag	PSPTO_0261
NCBI Old Locus Tag	PSPTO0261
UniParc	UPI0000008385
UniProtKB Acc	Q88AX2
UniProtKB ID	Q88AX2_PSESM
UniRef100	UniRef100_A0A038GHM0
UniRef50	UniRef50_A8I3H8
UniRef90	UniRef90_A0A038GHM0

Product

Feature Type	CDS
Coding Frame	1
Product Name	AsnC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7)	1.37
Kyte-Doolittle Hydrophobicity Value	-0.101
Molecular Weight (kDa)	18.5
Isoelectric Point (pI)	7.66

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 409 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017210 (80 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0261 Search term: AsnC family transcriptional regulator

Human Homologs

References