Pseudomonas syringae pv. tomato DC3000, PSPTO_0374

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0374
NCBI Old Locus Tag	PSPTO0374
Name	Synonym: PSPTO0374
Replicon	chromosome
Genomic location	411649 - 412236 (- strand)

Cross-References

RefSeq	NP_790223.1
GI	28867604
Entrez	1181983
INSDC	AAO53918.1
NCBI Locus Tag	PSPTO_0374
NCBI Old Locus Tag	PSPTO0374
UniParc	UPI00000083F2
UniProtKB Acc	Q88AL6
UniProtKB ID	Q88AL6_PSESM
UniRef100	UniRef100_Q88AL6
UniRef50	UniRef50_Q88AL6
UniRef90	UniRef90_Q88AL6

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-8.40
Kyte-Doolittle Hydrophobicity Value	-0.095
Molecular Weight (kDa)	21.5
Isoelectric Point (pI)	4.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017259 (17 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0374

Human Homologs

References