Pseudomonas syringae pv. tomato DC3000, PSPTO_0415

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0415
NCBI Old Locus Tag	PSPTO0415
Name	Synonym: PSPTO0415
Replicon	chromosome
Genomic location	462120 - 462458 (+ strand)

Cross-References

RefSeq	NP_790264.1
GI	28867645
Entrez	1182024
INSDC	AAO53959.1
NCBI Locus Tag	PSPTO_0415
NCBI Old Locus Tag	PSPTO0415
UniParc	UPI000000841B
UniProtKB Acc	Q88AH5
UniProtKB ID	Q88AH5_PSESM
UniRef100	UniRef100_Q88AH5
UniRef50	UniRef50_Q88AH5
UniRef90	UniRef90_Q88AH5

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.92
Kyte-Doolittle Hydrophobicity Value	0.732
Molecular Weight (kDa)	11.2
Isoelectric Point (pI)	8.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 15 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000350 (419 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0415

Human Homologs

References