Pseudomonas syringae pv. tomato DC3000, PSPTO_0455 (fdhA-1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0455
NCBI Old Locus TagPSPTO0455
Name
fdhA-1
Synonym: PSPTO0455
Replicon chromosome
Genomic location 497858 - 499057 (- strand)

Cross-References

RefSeq NP_790304.1
GI 28867685
Entrez 1182064
INSDC AAO53999.1
NCBI Locus Tag PSPTO_0455
NCBI Old Locus Tag PSPTO0455
UniParc UPI0000008441
UniProtKB Acc Q88AD7
UniProtKB ID Q88AD7_PSESM
UniRef100 UniRef100_A0A038G843
UniRef50 UniRef50_Q52078
UniRef90 UniRef90_Q48CN7

Product

Feature Type CDS
Coding Frame 1
Product Name
glutathione-independent formaldehyde dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -5.32
Kyte-Doolittle Hydrophobicity Value 0.099
Molecular Weight (kDa) 41.8
Isoelectric Point (pI) 6.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1KOL OXIDOREDUCTASE 12/21/01 Crystal structure of formaldehyde dehydrogenase Pseudomonas putida 1.65 X-RAY DIFFRACTION 90.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 529 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003315 (1429 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0455
Search term: fdhA-1

Human Homologs

References

No references are associated with this feature.