Pseudomonas syringae pv. tomato DC3000, PSPTO_0468

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0468
NCBI Old Locus Tag	PSPTO0468
Name	Synonym: PSPTO0468
Replicon	chromosome
Genomic location	514044 - 514301 (+ strand)

Cross-References

RefSeq	NP_790317.1
GI	28867698
Entrez	1182077
INSDC	AAO54012.1
NCBI Locus Tag	PSPTO_0468
NCBI Old Locus Tag	PSPTO0468
UniParc	UPI000000844E
UniProtKB Acc	Q88AC4
UniProtKB ID	Q88AC4_PSESM
UniRef100	UniRef100_Q88AC4
UniRef50	UniRef50_Q48CQ0
UniRef90	UniRef90_Q48CQ0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.01
Kyte-Doolittle Hydrophobicity Value	-0.434
Molecular Weight (kDa)	9.2
Isoelectric Point (pI)	4.27

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004963 (497 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0468

Human Homologs

References