Pseudomonas syringae pv. tomato DC3000, PSPTO_0485

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0485
NCBI Old Locus TagPSPTO0485
Name
Synonym: PSPTO0485
Replicon chromosome
Genomic location 531564 - 532583 (+ strand)

Cross-References

RefSeq NP_790334.1
GI 28867715
Entrez 1182094
INSDC AAO54029.1
NCBI Locus Tag PSPTO_0485
NCBI Old Locus Tag PSPTO0485
UniParc UPI000000845F
UniProtKB Acc Q88AA7
UniProtKB ID Q88AA7_PSESM
UniRef100 UniRef100_Q88AA7
UniRef50 UniRef50_E2XTN4
UniRef90 UniRef90_Q88AA7

Product

Feature Type CDS
Coding Frame 1
Product Name
LacI family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -2.71
Kyte-Doolittle Hydrophobicity Value -0.082
Molecular Weight (kDa) 37.2
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 378 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017277 (58 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0485

Human Homologs

References

No references are associated with this feature.