Pseudomonas syringae pv. tomato DC3000, PSPTO_0502 (hopF2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0502
NCBI Old Locus TagPSPTO0502
Name
hopF2
Synonym: PSPTO0502
Replicon chromosome
Genomic location 549423 - 550037 (- strand)

Cross-References

RefSeq NP_790351.1
GI 28867732
Entrez 1182111
INSDC AAP83640.1
NCBI Locus Tag PSPTO_0502
NCBI Old Locus Tag PSPTO0502
UniParc UPI0000008470
UniProtKB Acc Q88A90
UniProtKB ID Q88A90_PSESM
UniRef100 UniRef100_Q88A90
UniRef50 UniRef50_Q88A90
UniRef90 UniRef90_Q88A90

Product

Feature Type CDS
Coding Frame 1
Product Name
type III effector HopF2
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) 3.60
Kyte-Doolittle Hydrophobicity Value -0.565
Molecular Weight (kDa) 22.4
Isoelectric Point (pI) 8.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017284 (4 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0502
Search term: hopF2

Human Homologs

References

No references are associated with this feature.