Pseudomonas syringae pv. tomato DC3000, PSPTO_0514 (pqqF)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0514
NCBI Old Locus Tag	PSPTO0514
Name	pqqF Synonym: PSPTO0514
Replicon	chromosome
Genomic location	561106 - 563445 (- strand)

Cross-References

RefSeq	NP_790362.1
GI	28867743
Entrez	1182123
INSDC	AAO54057.1
NCBI Locus Tag	PSPTO_0514
NCBI Old Locus Tag	PSPTO0514
UniParc	UPI000000847B
UniProtKB Acc	Q88A79
UniProtKB ID	PQQF_PSESM
UniRef100	UniRef100_Q88A79
UniRef50	UniRef50_Q88A79
UniRef90	UniRef90_Q88A79

Product

Feature Type	CDS
Coding Frame	1
Product Name	coenzyme PQQ synthesis protein F
Synonyms
Evidence for Translation
Charge (pH 7)	1.45
Kyte-Doolittle Hydrophobicity Value	-0.142
Molecular Weight (kDa)	86.2
Isoelectric Point (pI)	7.11

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 432 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003460 (500 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0514 Search term: pqqF Search term: coenzyme PQQ synthesis protein F

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000262679 nardilysin convertase [Source:HGNC Symbol;Acc:HGNC:7995] E-value: 3.3e-18 Percent Identity: 33.9

References